Near-Infrared Camera
near-infrared-camera

_The Infragram Kickstarter video, a great introduction to the project._ ###Introduction Vineyards, large farms, and NASA all use **near-infrared photography** for assessing plant health, usually by mounting expensive sensors on airplanes and satellites. At Public Lab, **we've developed a Do-It-Yourself way to take these kinds of photos**, enabling us to monitor our environment through quantifiable data. Our technique uses a modified digital camera to capture near-infrared and blue light in the same image, but in different color channels. We then [post-process the image](#How+to+process+your+images:) (using [Infragram.org](http://infragram.org)) to attempt to infer how much it is photosynthesizing. This allows us to better understand and quantify how much of the available light plants are metabolizing into sugar via photosynthesis. > You can do this yourself (as with all Public Lab tools) but there is also an [Infragram DIY Filter Pack](http://store.publiclab.org/products/infragram-diy-filter-pack) available in the Public Lab Store. We [ran a Kickstarter](http://kickstarter.com/projects/publiclab/infragram-the-infrared-photography-project/) for a version of this camera we call the **Infragram**. [Read more about it here »](/wiki/infragram) Here's the video from the Kickstarter, which offers a nice visual explanation of the technique: ###What is it good for? Multispectral or infrared/visible photography has seen a variety of applications in the decades [since it was developed](#Background:+satellite+infrared+imaging). We have focused on the following uses: - Take pictures to examine plant health in backyard gardens, farms, parks, and nearby wetlands - Monitor your household plants - Teach students about plant growth and photosynthesis - Create exciting science fair projects - Generate verifiable, open environmental data - Check progress of environmental restoration projects - Document unhealthy areas of your local ecology (for instance, algal blooms) Notable uses include [this photograph of an unidentified plume of material in the Gowanus Canal](/notes/liz/8-3-2011/infrared-balloon-image-reveals-gowanus-plume) (and [writeup by TechPresident](http://techpresident.com/blog-entry/how-diy-science-solving-ecological-mysteries-new-york-city)) and a variety of projects at a small farm in New Hampshire [at the annual iFarm event](/tag/ifarm). The [Louisiana Universities Marine Consortium](http://lumcon.edu) has also [collaborated with Public Lab contributors to measure wetlands loss](/notes/shannon/5-29-2011/plots-and-lumcon-collaboration) following the Deepwater Horizon oil disaster. **Here's an example** of what one of our "Infragram" cameras sees (left) and the post-processing analysis which shows photosynthetic activity, or plant health (right). This picture was taken from a commercial airplane flight: [![infragram](https://i.publiclab.org/system/images/photos/000/000/424/medium/aerial-split.jpg)](https://i.publiclab.org/system/images/photos/000/000/424/original/aerial-split.jpg) ###How does it work? **Camera modification:** We've worked on several different techniques, from [dual camera systems](/wiki/dual-camera-kit-guide) to the current, single-camera technique. This involves removing the infrared-blocking filter from [almost any digital camera](/tag/infragram-conversion), and adding a [specific blue filter](/wiki/infragram#Filters). ![swap.png](https://i.publiclab.org/system/images/photos/000/000/376/medium/swap.png) This filters out the red light, and **measures infrared light in its place** using a piece of carefully chosen "NGB" or "infrablue" filter. Read more about [the development of this technique here](http://publiclab.org/notes/cfastie/04-20-2013/superblue). You can also learn more about how digital camera image sensors detect colors [at this great tutorial by Bigshot](http://www.bigshotcamera.com/learn/image-sensor/index). **Post-processing:** Once you take a multispectral photograph with a modified camera, you must [post-process it](#How+to+process+your+images:), compositing the infrared and visible data to generate a new image which (if it works) displays healthy, photosynthetically active areas as bright regions. An in-depth article on the technique by Chris Fastie (albeit using red instead of blue for visible light) [can be found here](/wiki/ndvi-plots-ir-camera-kit). **History of the project:** While we used to use a two-camera system, [research by Chris Fastie](/notes/cfastie/04-20-2013/superblue) and [other Public Lab contributors](/tag/near-infrared-camera) have led to the use of a **single camera which can image in both infrared and visible light simultaneously**. The Infrablue filter is just a piece of carefully chosen theater gel which was examined using [a DIY spectrometer](/wiki/spectrometer). You can use this filter to turn most webcams or cheap point-and-shoots into an infrared/visible camera. ###Background: satellite infrared imaging The study of Earth's environment from space got its start in 1972 when the first Landsat satellite was launched. The multispectral scanner it carried, like the scanners on all subsequent Landsat satellites, recorded images with both visible and near infrared light. Remote sensing "scientists" quickly learned that by combining visible and infrared data, they could reveal critical information about the health of vegetation. For example, the normalized difference vegetation index (NDVI) highlights the difference between the red and infrared wavelengths that are reflected from vegetation. Because red light is used by plants for photosynthesis but infrared light is not, NDVI allows "scientists" to estimate the amount of healthy foliage in every satellite image. Thousands of "scientists", including landscape ecologists, global change biologists, and habitat specialists have relied on these valuable satellite-based NDVI images for decades. There are public sources of infrared photography for the US available through the Department of Agriculture -- [NAIP](http://datagateway.nrcs.usda.gov/) and [Vegscape](http://nassgeodata.gmu.edu/VegScape/) -- but this imagery is not collected when, as often, or at useable scale for individuals who are managing small plots. ![ndvi-vis-comparison.jpg](/system/images/photos/000/001/289/medium/ndvi-vis-comparison.jpg) Caption: Normal color photo (top) and normalized difference vegetation index (NDVI) image. NDVI image was derived from two color channels in a single photo taken with a camera modified with a special infrared filter. Note that tree trunks, brown grass, and rocks have very low NDVI values because they are not photosynthetic. Healthy plants typically have NDVI values between 0.1 and 0.9. Images by Chris Fastie. Visit the [gallery of high-res images by Chris Fastie](https://plus.google.com/photos/116103622078305917397/albums/5878196749239180465/5878198341400814034) **** ## Frequently Asked Questions Ask a question about infrared imaging [notes:question:infragram] **** ## How to process your images (this section is moved to and updated at http://publiclab.org/wiki/near-infrared-imaging) We're working on an easy process to generate composite, infrared + visible images that will reveal new details of plant health and photosynthesis. There are several approaches: * The **easiest way** is to process your images online at the free, open source [Infragram.org](http://infragram.org) * [Ned Horning's](/profile/nedhorning) [PhotoMonitoring plugin](/wiki/photo-monitoring-plugin) * Manual processing * [in Photoshop](/notes/warren/10-25-2011/video-tutorial-creating-infrared-composites-aerial-wetlands-imagery) * [or GIMP](/notes/warren/10-27-2011/video-tutorial-creating-false-color-ndvi-aerial-wetlands-imagery) * Using MapKnitter.org (deprecated) * Command-line processing of single images and rendering of movies using a Python script. Source code is [here](https://github.com/Pioneer-Valley-Open-Science/infrapix) **Note:** Older versions of this page have been kept at the following wiki page: http://publiclab.org/wiki/near-infrared-camera-history...


Author Comment Last activity Moderation
cfastie "Here is a tab delimited file of the new lut: NDVI_VGYRM-lut.txt Will Fiji make a lut file from this? " | Read more » over 10 years ago
alanw "Greetings, Just post the CSV file for the gradient. It is easy enough to create the LUT file. " | Read more » over 10 years ago
alanw "Hi Ned, I have a son who is a pretty good programmer and knows Java. I talked to him and he is seeing if he can use your plugin and add a piece to..." | Read more » over 10 years ago
amysoyka "The colour ranges of retinal cones are: Blue-Yellow Red-Green Light-Dark In photography: The subtractive colour spectrum (start by calibrating Whi..." | Read more » over 10 years ago
nedhorning "Hi - At this point the plugin does not subtract the NIR from the red. I've been doing this subtraction as part of my calibration tests: http://publ..." | Read more » over 10 years ago
aswicks "Ned, Using a red filter, does the plugin subtract the blue (NIR) band from the red (red + NIR) to get a red band and then do the NDVI & DVI mat..." | Read more » over 10 years ago
ostman "Matt, Noah Hochman replied via email; he's sending a card. Thanks! Andy " | Read more » over 10 years ago
ostman "Thanks for the response, Matthew. No… slot is empty Looked through the box several times. Definitely nowhere to be found. Andy Smith " | Read more » over 10 years ago
mathew "the card is in the camera, because we tested each one. your camera doesn't have a card in it? " | Read more » over 10 years ago
ostman "I received the kickstarter camera today. It came with a micros adapter, but no card. Were we supposed to get a card with it? Is there a page other ..." | Read more » over 10 years ago
natalie " " | Read more » over 10 years ago
natalie "What about a different filter? Or how do we white balance these? Next Steps suggestions. " | Read more » over 10 years ago
warren ":-/ doesn't look good. I think without white balancing it, we're going to have a hard time using this cam. http://infragram.org/i/53f266c40ab503..." | Read more » over 10 years ago
natalie " The plant is dying but it still have some green to it. How is this? " | Read more » over 10 years ago
andresc4 "Ohhh thats why... i will give a try to the infinity focus... thats under "subject distance: option ? The nex3 and the nex5 have the same sensor I t..." | Read more » over 10 years ago
cfastie "Which cameras are you having focus problems with? The A2300 does not have manual focus, so the best you can do is probably infinity focus mode whic..." | Read more » over 10 years ago
andresc4 "Hey guys i have been offline for a while, with a lot of work and other projects, but now I want to continue with this! Im having a lot of issues w..." | Read more » over 10 years ago
theowallis "Thanks for your comment, this is what I was afraid of; there is no relatively simple way to isolate specific wavelengths and furthermore if this wa..." | Read more » over 10 years ago
cfastie "Hi Pat, The Wratten 87 passes only NIR; it's great for the NIR camera in a dual camera rig. The Wratten 25 is the best filter I have used for a sin..." | Read more » over 10 years ago
patcoyle "Good stuff. " | Read more » over 10 years ago
patcoyle "Chris, Nice rig. Great value. I like the results. Has there been discussion of the Wratten 87 polyester filter vs Wratten 25? " | Read more » over 10 years ago
warren "OK - try it out! I don't think it works in the WebGL version but in the basic version it should: http://infragram.org/sandbox/ " | Read more » over 10 years ago
cfastie "I get it now. Your translation is good. The blue is actually a light blue, I think [140 140 255] at 0.56. And I put pure green in there explic..." | Read more » over 10 years ago
warren "Whoa... no, a bit tough to use. If you can describe it as a sequence of colors, the format I mentioned will interpolate gradients between them. Jus..." | Read more » over 10 years ago